yvdB [2019-06-17 12:21:27]

putative anion transporter

locus: BSU34660

pI: 9.64

mw: 57.26 kDa

protein length: 530 aa

gene length: 1593 bp

function: unknown

product: putative anion transporter

essential: no

synonyms

Genomic Context

categories

• [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

Gene

Coordinates: 3,559,979 3,561,571

The protein

Structure

• [PDB|5DA0] (fumarate transporter from Deinococcus geothermalis, 31% identity) [pubmed|26367249]

[SW|Localization]

• cell membrane (according to UniProt)

Expression and Regulation

Operons

• genes: [gene|E00889289B07BE78CC0C8E0962A55C3B14871E00|yvdA]-[gene|7028580E25DD6C1D49A14F29DDCC02012F94FED7|yvdB]
  description: [Pubmed|22383849]

Biological materials

Mutant

• MGNA-B631 (yvdB::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1630 NBRP B. subtilis, Japan]
• BKE34660 ([gene|7028580E25DD6C1D49A14F29DDCC02012F94FED7|yvdB]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE34660 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TCGCATATTTTGTTATAACC, downstream forward: _UP4_TAAAAAAAGCGGCCATCGCG
• BKK34660 ([gene|7028580E25DD6C1D49A14F29DDCC02012F94FED7|yvdB]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK34660 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TCGCATATTTTGTTATAACC, downstream forward: _UP4_TAAAAAAAGCGGCCATCGCG

References

• 22383849,26367249